merquaco.data_loss.FOVDropout.detect_false_positives

static FOVDropout.detect_false_positives(fovs: DataFrame, codebook: DataFrame) → DataFrame

Detects false positive FOV dropouts by evaluating codebook rounds in which the genes dropped for a target FOV

Parameters:

• fovs (pd.DataFrame) – FOVs table

• codebook (pd.DataFrame) – Experiment codebook table

Returns:

fovs – Updated FOVs dataframe with false positive information

Return type:

pd.DataFrame