merquaco.data_loss.DropoutResult.get_dropped_genes

DropoutResult.get_dropped_genes(fov: str = '', dic: bool = False)

Get a list of dropped genes. If FOV is specified, gets a list of dropped genes for the specified FOV. If dic=True, creates a dictionary of FOVs and dropped genes

Parameters:

• fov (str, optional) – FOV to subset dropped gene list by. Default is ‘’.

• dic (bool, optional) – Whether to return dictionary of dropped FOVs and genes. Default is False.

Returns:

• list – If fov is specified. List of dropped genes in that FOV.

• dict – If dic is True. Dictionary of dropped genes per FOV

• list – If all arguments are default. List of dropped genes.