merquaco.figures.plot_transcripts_per_z

merquaco.figures.plot_transcripts_per_z(transcripts_per_z: ndarray, ax: Axes = None, title: str = '', out_file: str = '')

Plot transcript counts for each z plane

Parameters:

• transcripts_per_z (np.ndarray) – Number of transcripts per z-plane

• num_planes (int, optional) – Number of planes to plot. Default is 7.

• ax (plt.Axes, optional) – Axes on which to plot. Default is None.

• title (str, optional) – Title for plot. Default is ‘’.

• out_file (str, optional) – Path at which to save figure. Default is ‘’

Raises:

ValueError –